Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | D5071_04860 | Not Available | Positive | 1030967 - 1031422 | 17587.8 |
| universal stress protein | D5071_04865 | Not Available | Positive | 1031589 - 1032017 | 15303.7 |
| ghot/ortt family toxin | D5071_04870 | Not Available | Negative | 1032084 - 1032269 | 7009.98 |
| hypothetical protein | D5071_04875 | Not Available | Positive | 1032425 - 1032718 | 10806.1 |
| hypothetical protein | D5071_04880 | Not Available | Positive | 1032877 - 1033158 | 10103.0 |
| hamp domain-containing protein | D5071_04885 | Not Available | Positive | 1034017 - 1035681 | 59327.1 |
| pepsy domain-containing protein | D5071_04890 | Not Available | Negative | 1035791 - 1037299 | 55420.2 |
| duf2946 domain-containing protein | D5071_04895 | Not Available | Negative | 1037402 - 1037899 | 17568.8 |
| glucan biosynthesis protein g | D5071_04900 | Not Available | Positive | 1038343 - 1039845 | 56408.4 |
| glucans biosynthesis glucosyltransferase mdoh | D5071_04905 | Not Available | Positive | 1039838 - 1042387 | 96685.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
