Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major coat protein | D5071_12940 | Not Available | Negative | 2847703 - 2847942 | 8135.01 |
| phage coat protein | D5071_12945 | Not Available | Negative | 2847972 - 2848067 | 3691.59 |
| Minor coat protein | D5071_12950 | Not Available | Negative | 2848067 - 2848153 | 2890.68 |
| G v protein | D5071_12955 | Not Available | Negative | 2848163 - 2848441 | 10172.2 |
| Hypothetical protein | D5071_12960 | Not Available | Negative | 2848454 - 2849569 | 42262.5 |
| Putative helicase | D5071_18485 | Not Available | Negative | 4078242 - 4080254 | 75734.9 |
| hypothetical | D5071_18490 | Not Available | Positive | 4081019 - 4081414 | 14956.1 |
| hypothetical | D5071_18495 | Not Available | Negative | 4081408 - 4081536 | 4989.68 |
| Terminase small subunit | D5071_18500 | Not Available | Negative | 4081523 - 4081873 | 12897.8 |
| hypothetical protein | D5071_18505 | Not Available | Positive | 4081978 - 4082205 | 8858.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
