Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfim family lipoprotein | D2183_14165 | Not Available | Negative | 2858744 - 2859067 | 11854.0 |
| phosphatidylserine synthase | D2183_14170 | Not Available | Negative | 2859113 - 2860468 | 52790.8 |
| protein lysine acetyltransferase | D2183_14175 | Not Available | Negative | 2860582 - 2863242 | 97985.1 |
| dtw domain-containing protein | D2183_14180 | Not Available | Negative | 2863274 - 2863972 | 25995.5 |
| thiol disulfide reductase thioredoxin | D2183_14185 | Not Available | Negative | 2864041 - 2864460 | 15555.6 |
| hypothetical protein | D2183_14190 | Not Available | Positive | 2864474 - 2864677 | 7674.21 |
| trna/rrna methyltransferase | D2183_14195 | Not Available | Positive | 2864667 - 2865704 | 37800.5 |
| uracil-dna glycosylase | D2183_14200 | Not Available | Negative | 2865752 - 2866441 | 25682.6 |
| autonomous glycyl radical cofactor grca | D2183_14205 | Not Available | Positive | 2866746 - 2867129 | 14269.0 |
| cysteine/o-acetylserine transporter | D2183_14210 | Not Available | Negative | 2867184 - 2867771 | 21305.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





