Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | D2183_13595 | Not Available | Positive | 2741256 - 2741999 | 27335.0 |
| duf2756 family protein | D2183_13600 | Not Available | Negative | 2741986 - 2742426 | 16564.9 |
| gamma-glutamyltransferase | D2183_13605 | Not Available | Positive | 2742546 - 2744291 | 61979.7 |
| n-acetyltransferase | D2183_13610 | Not Available | Negative | 2744352 - 2744840 | 18812.8 |
| hypothetical protein | D2183_13615 | Not Available | Positive | 2744955 - 2745140 | 6736.08 |
| oxidoreductase | D2183_13620 | Not Available | Positive | 2745174 - 2746211 | 38744.0 |
| quercetin 2,3-dioxygenase | D2183_13625 | Not Available | Positive | 2746334 - 2747029 | 26280.8 |
| gntr family transcriptional regulator | D2183_13630 | Not Available | Positive | 2747253 - 2748248 | 36424.3 |
| gluconokinase | D2183_13635 | Not Available | Positive | 2748387 - 2748914 | 19486.3 |
| low-affinity gluconate transporter | D2183_13640 | Not Available | Positive | 2748918 - 2750258 | 46418.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





