Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysoplasmalogenase | D2183_13495 | Not Available | Negative | 2722998 - 2723624 | 23791.9 |
| duf2500 domain-containing protein | D2183_13500 | Not Available | Positive | 2723765 - 2724124 | 13529.4 |
| duf1145 family protein | D2183_13505 | Not Available | Negative | 2724127 - 2724396 | 10280.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | D2183_13510 | Not Available | Negative | 2724386 - 2724982 | 21706.9 |
| signal recognition particle-docking protein ftsy | D2183_13515 | Not Available | Positive | 2725132 - 2726619 | 54417.2 |
| cell division atp-binding protein ftse | D2183_13520 | Not Available | Positive | 2726622 - 2727290 | 24440.8 |
| abc transporter permease | D2183_13525 | Not Available | Positive | 2727283 - 2728341 | 38545.9 |
| rna polymerase sigma factor rpoh | D2183_13530 | Not Available | Positive | 2728586 - 2729440 | 32470.6 |
| hypothetical protein | D2183_13535 | Not Available | Positive | 2729468 - 2729653 | 7058.72 |
| branched chain amino acid abc transporter substrate-binding protein | D2183_13540 | Not Available | Positive | 2729712 - 2730815 | 39064.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





