Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter permease subunit nikc | D2183_13445 | Not Available | Negative | 2712360 - 2713193 | 30363.8 |
| nickel abc transporter permease subunit nikb | D2183_13450 | Not Available | Negative | 2713190 - 2714134 | 35237.3 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | D2183_13455 | Not Available | Negative | 2714134 - 2715708 | 58814.2 |
| 4'-phosphopantetheinyl transferase acpt | D2183_13460 | Not Available | Negative | 2715819 - 2716406 | 21715.8 |
| ai-2e family transporter | D2183_13465 | Not Available | Negative | 2716461 - 2717510 | 38480.8 |
| mfs transporter | D2183_13470 | Not Available | Positive | 2717642 - 2718859 | 42188.4 |
| protein dcrb | D2183_13475 | Not Available | Negative | 2718863 - 2719420 | 19788.7 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | D2183_13480 | Not Available | Negative | 2719493 - 2720158 | 25304.3 |
| sulfurtransferase tusa | D2183_13485 | Not Available | Positive | 2720379 - 2720624 | 9095.09 |
| zinc/cadmium/mercury/lead-transporting atpase | D2183_13490 | Not Available | Negative | 2720726 - 2722924 | 76733.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





