Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2776 domain-containing protein | D2183_13390 | Not Available | Negative | 2699366 - 2700418 | 37621.3 |
| duf4049 domain-containing protein | D2183_13395 | Not Available | Positive | 2700717 - 2702390 | 64308.6 |
| duf4049 domain-containing protein | D2183_13400 | Not Available | Positive | 2702652 - 2704274 | 61112.8 |
| hlyd family secretion protein | D2183_13405 | Not Available | Positive | 2704640 - 2705707 | 38834.6 |
| abc transporter atp-binding protein/permease | D2183_13410 | Not Available | Positive | 2705704 - 2708439 | 100711.0 |
| inner membrane transport permease yhhj | D2183_13415 | Not Available | Positive | 2708439 - 2709563 | 41050.2 |
| type ii toxin-antitoxin system hicb family antitoxin | D2183_13425 | Not Available | Positive | 2709908 - 2710267 | 13403.0 |
| nickel-responsive transcriptional regulator nikr | D2183_13430 | Not Available | Negative | 2710387 - 2710788 | 15094.7 |
| abc transporter atp-binding protein | D2183_13435 | Not Available | Negative | 2710793 - 2711599 | 29712.4 |
| abc transporter atp-binding protein | D2183_13440 | Not Available | Negative | 2711596 - 2712360 | 26814.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





