Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D2183_12780 | Not Available | Negative | 2570569 - 2571969 | 51470.0 |
| arac family transcriptional regulator | D2183_12785 | Not Available | Positive | 2572195 - 2573010 | 31475.1 |
| l-ribulose-5-phosphate 4-epimerase | D2183_12790 | Not Available | Negative | 2573042 - 2573737 | 25655.6 |
| l-ribulose-5-phosphate 3-epimerase | D2183_12795 | Not Available | Negative | 2573731 - 2574591 | 32397.9 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | D2183_12800 | Not Available | Negative | 2574584 - 2575246 | 23517.2 |
| carbohydrate kinase | D2183_12805 | Not Available | Negative | 2575243 - 2576739 | 55293.1 |
| trap transporter substrate-binding protein dctp | D2183_12810 | Not Available | Negative | 2576743 - 2577729 | 36020.1 |
| 2,3-diketo-l-gulonate transporter large permease yian | D2183_12815 | Not Available | Negative | 2577742 - 2579019 | 45320.0 |
| 2,3-diketo-l-gulonate trap transporter permease | D2183_12820 | Not Available | Negative | 2579022 - 2579495 | 17516.9 |
| yhch/yjgk/yial family protein | D2183_12825 | Not Available | Negative | 2579613 - 2580080 | 17546.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





