Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug/spermidine efflux smr transporter subunit mdti | D2183_12520 | Not Available | Positive | 2526163 - 2526492 | 11662.8 |
| serine protease | D2183_12525 | Not Available | Negative | 2526531 - 2527352 | 29250.6 |
| hypothetical protein | D2183_12530 | Not Available | Negative | 2527452 - 2527535 | 3206.2 |
| acid shock protein | D2183_12535 | Not Available | Negative | 2527628 - 2527963 | 11579.1 |
| mfs transporter | D2183_12545 | Not Available | Negative | 2528360 - 2529613 | 45260.2 |
| lysr family transcriptional regulator | D2183_12550 | Not Available | Positive | 2529720 - 2530613 | 33301.4 |
| rok family transcriptional regulator | D2183_12555 | Not Available | Positive | 2530748 - 2531968 | 44276.7 |
| dethiobiotin synthase | D2183_12560 | Not Available | Positive | 2532093 - 2532788 | 24968.4 |
| voltage-gated clc-type chloride channel clcb | D2183_12565 | Not Available | Negative | 2532741 - 2534033 | 45707.0 |
| tat proofreading chaperone dmsd | D2183_12570 | Not Available | Negative | 2534192 - 2534806 | 23386.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





