Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine/pyridoxamine 5'-phosphate oxidase | D2183_12315 | Not Available | Positive | 2485629 - 2486285 | 25532.6 |
| tyrosine--trna ligase | D2183_12320 | Not Available | Positive | 2486414 - 2487688 | 47529.6 |
| pyridoxamine kinase | D2183_12325 | Not Available | Positive | 2487746 - 2488609 | 31350.1 |
| glutathione s-transferase | D2183_12330 | Not Available | Negative | 2488653 - 2489258 | 22855.6 |
| dipeptide and tripeptide permease a | D2183_12335 | Not Available | Negative | 2489364 - 2490866 | 54008.4 |
| hypothetical protein | D2183_12340 | Not Available | Negative | 2491149 - 2491349 | 7910.78 |
| endonuclease iii | D2183_12345 | Not Available | Negative | 2491477 - 2492112 | 23563.7 |
| electron transporter rsxe | D2183_12350 | Not Available | Negative | 2492112 - 2492807 | 24462.6 |
| electron transport complex subunit g | D2183_12355 | Not Available | Negative | 2492811 - 2493431 | 21959.2 |
| electron transport complex subunit d | D2183_12360 | Not Available | Negative | 2493435 - 2494493 | 38116.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





