Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D2183_11860 | Not Available | Positive | 2394553 - 2395089 | 20368.3 |
| fructosamine kinase family protein | D2183_11865 | Not Available | Negative | 2395130 - 2395990 | 32479.4 |
| endoribonuclease ghos | D2183_11870 | Not Available | Negative | 2396096 - 2396386 | 10851.6 |
| 6-phosphofructokinase ii | D2183_11875 | Not Available | Negative | 2396487 - 2397416 | 32430.9 |
| duf481 domain-containing protein | D2183_11880 | Not Available | Positive | 2397703 - 2398461 | 27599.6 |
| hypothetical protein | D2183_11885 | Not Available | Negative | 2398514 - 2398621 | 4115.44 |
| shet2/espl2 family type iii secretion system effector toxin | D2183_11890 | Not Available | Negative | 2398788 - 2400686 | 70831.0 |
| threonine--trna ligase | D2183_11895 | Not Available | Positive | 2401209 - 2403137 | 74018.4 |
| translation initiation factor if-3 | D2183_11900 | Not Available | Positive | 2403141 - 2403683 | 20565.2 |
| 50s ribosomal protein l35 | D2183_11905 | Not Available | Positive | 2403780 - 2403977 | 7289.38 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





