Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | D2183_11545 | Not Available | Negative | 2333349 - 2334824 | 55983.4 |
| yeah/yhbh family protein | D2183_11550 | Not Available | Negative | 2334971 - 2336254 | 49496.2 |
| prka family serine protein kinase | D2183_11555 | Not Available | Negative | 2336367 - 2338301 | 74484.3 |
| mipa/ompv family protein | D2183_11560 | Not Available | Positive | 2338737 - 2339483 | 27846.4 |
| aldo/keto reductase | D2183_11565 | Not Available | Positive | 2339573 - 2340427 | 30972.4 |
| d-hexose-6-phosphate mutarotase | D2183_11570 | Not Available | Negative | 2340478 - 2341362 | 32657.8 |
| aldehyde dehydrogenase | D2183_11575 | Not Available | Negative | 2341446 - 2342441 | 35534.5 |
| peptide-methionine (r)-s-oxide reductase | D2183_11580 | Not Available | Positive | 2342783 - 2343196 | 15452.0 |
| duf1315 family protein | D2183_11585 | Not Available | Positive | 2343238 - 2343510 | 10273.4 |
| alcohol dehydrogenase | D2183_11590 | Not Available | Positive | 2343880 - 2344956 | 38715.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





