Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | D2183_11445 | Not Available | Negative | 2318174 - 2319139 | 35886.4 |
| ring-hydroxylating oxygenase subunit alpha | D2183_11450 | Not Available | Negative | 2319195 - 2320319 | 42577.0 |
| bcct family transporter yeav | D2183_11455 | Not Available | Negative | 2320351 - 2321961 | 58673.4 |
| tartrate dehydrogenase | D2183_11460 | Not Available | Negative | 2322212 - 2323297 | 40276.1 |
| lysr family transcriptional regulator | D2183_11465 | Not Available | Positive | 2323400 - 2324323 | 34646.8 |
| leucine efflux protein | D2183_11470 | Not Available | Positive | 2324450 - 2325088 | 23259.0 |
| duf1971 domain-containing protein | D2183_11475 | Not Available | Positive | 2325261 - 2325620 | 13612.2 |
| duf1869 domain-containing protein | D2183_11480 | Not Available | Positive | 2325624 - 2325806 | 6608.63 |
| glsb/yeaq/ymge family stress response membrane protein | D2183_11485 | Not Available | Positive | 2325954 - 2326202 | 8671.14 |
| protein yoaj | D2183_11490 | Not Available | Negative | 2326261 - 2326335 | 2691.57 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





