Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coenzyme a pyrophosphatase | D2183_11395 | Not Available | Negative | 2308237 - 2308815 | 21495.0 |
| aminodeoxychorismate synthase component 1 | D2183_11400 | Not Available | Negative | 2308819 - 2310180 | 51015.3 |
| yoah family protein | D2183_11405 | Not Available | Positive | 2310254 - 2310433 | 6554.7 |
| duf1889 family protein | D2183_11410 | Not Available | Negative | 2310553 - 2310912 | 13244.0 |
| rida family protein | D2183_11415 | Not Available | Negative | 2311274 - 2311618 | 12493.9 |
| atp-dependent dna helicase | D2183_11420 | Not Available | Positive | 2311750 - 2313660 | 70365.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | D2183_11425 | Not Available | Positive | 2313718 - 2314413 | 25101.2 |
| slp family lipoprotein yeay | D2183_11430 | Not Available | Positive | 2314452 - 2315033 | 20924.3 |
| long-chain-fatty-acid--coa ligase | D2183_11435 | Not Available | Positive | 2315238 - 2316923 | 62335.7 |
| ribonuclease d | D2183_11440 | Not Available | Positive | 2316993 - 2318120 | 42736.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





