Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein | D2183_10870 | Not Available | Positive | 2203807 - 2205591 | 68636.8 |
| type i restriction endonuclease subunit r | D2183_10875 | Not Available | Positive | 2205661 - 2208945 | 124111.0 |
| m48 family peptidase | D2183_10880 | Not Available | Positive | 2208942 - 2209697 | 29280.9 |
| hypothetical protein | D2183_10885 | Not Available | Positive | 2209749 - 2210258 | 19267.8 |
| duf262 domain-containing protein | D2183_10890 | Not Available | Positive | 2210316 - 2212187 | 72949.7 |
| yeca family protein | D2183_10895 | Not Available | Positive | 2212786 - 2213451 | 24972.5 |
| tyrosine transporter tyrp | D2183_10900 | Not Available | Negative | 2213502 - 2214713 | 42865.9 |
| duf2492 family protein | D2183_10905 | Not Available | Positive | 2214904 - 2215143 | 8644.22 |
| non-heme ferritin | D2183_10910 | Not Available | Negative | 2215181 - 2215678 | 19424.9 |
| hypothetical protein | D2183_10915 | Not Available | Negative | 2215849 - 2216172 | 11756.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





