Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D2183_10820 | Not Available | Negative | 2197388 - 2197579 | 6827.95 |
| toxin cbta | D2183_10825 | Not Available | Negative | 2197579 - 2197953 | 13899.7 |
| type iv toxin-antitoxin system yeeu family antitoxin | D2183_10830 | Not Available | Negative | 2198042 - 2198410 | 13626.3 |
| duf987 domain-containing protein | D2183_10835 | Not Available | Negative | 2198484 - 2198705 | 8411.2 |
| dna repair protein radc | D2183_10840 | Not Available | Negative | 2198768 - 2199214 | 16543.0 |
| antirestriction protein | D2183_10845 | Not Available | Negative | 2199260 - 2199739 | 18127.3 |
| is3 family transposase | D2183_10850 | Not Available | Positive | 2199862 - 2200025 | 6189.08 |
| type i restriction-modification system subunit m | D2183_10855 | Not Available | Positive | 2200377 - 2201900 | 57239.9 |
| restriction endonuclease subunit s | D2183_10860 | Not Available | Positive | 2201890 - 2203104 | 45885.8 |
| yeca family protein | D2183_10865 | Not Available | Positive | 2203101 - 2203784 | 25766.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





