Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low-affinity putrescine importer plap | D2183_10765 | Not Available | Positive | 2188460 - 2189818 | 49540.5 |
| yeee/yede family protein | D2183_10770 | Not Available | Positive | 2189997 - 2191055 | 38118.7 |
| hypothetical protein | D2183_10775 | Not Available | Positive | 2191069 - 2191296 | 8092.61 |
| exodeoxyribonuclease i | D2183_10780 | Not Available | Negative | 2191339 - 2192766 | 54487.6 |
| serine-type d-ala-d-ala carboxypeptidase dacd | D2183_10785 | Not Available | Positive | 2192975 - 2194141 | 43330.5 |
| dna gyrase inhibitor sbmc | D2183_10790 | Not Available | Positive | 2194260 - 2194733 | 18082.4 |
| fusc family protein | D2183_10795 | Not Available | Positive | 2194931 - 2195989 | 39957.7 |
| duf496 family protein | D2183_10800 | Not Available | Positive | 2196161 - 2196490 | 12778.5 |
| ethanolamine utilization protein | D2183_10805 | Not Available | Negative | 2196591 - 2196773 | 6419.74 |
| duf957 domain-containing protein | D2183_10815 | Not Available | Negative | 2197262 - 2197375 | 4241.28 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





