Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system ibs family toxin | D2183_10455 | Not Available | Positive | 2125947 - 2126006 | 2232.03 |
| vwa domain-containing protein | D2183_10460 | Not Available | Positive | 2126227 - 2126886 | 24191.9 |
| protein phosphatase 2c domain-containing protein | D2183_10465 | Not Available | Positive | 2126883 - 2127644 | 27290.6 |
| molecular chaperone | D2183_10475 | Not Available | Negative | 2129580 - 2130932 | 49278.1 |
| heat-shock protein | D2183_10480 | Not Available | Negative | 2130857 - 2131012 | 5759.05 |
| dna-3-methyladenine glycosylase 2 | D2183_10485 | Not Available | Positive | 2131066 - 2131923 | 31694.4 |
| diguanylate cyclase | D2183_10490 | Not Available | Negative | 2131962 - 2135279 | 123954.0 |
| uridine kinase | D2183_10495 | Not Available | Positive | 2135597 - 2136238 | 24354.6 |
| dctp deaminase | D2183_10500 | Not Available | Positive | 2136330 - 2136911 | 21222.4 |
| outer membrane assembly protein asma | D2183_10505 | Not Available | Positive | 2136933 - 2138786 | 68993.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





