Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | D2183_10095 | Not Available | Negative | 2047183 - 2048067 | 31568.6 |
| cidb/lrgb family autolysis modulator | D2183_10100 | Not Available | Negative | 2048197 - 2048892 | 24471.1 |
| hypothetical protein | D2183_10105 | Not Available | Negative | 2048889 - 2049287 | 14579.6 |
| trna dihydrouridine(16) synthase dusc | D2183_10110 | Not Available | Positive | 2049526 - 2050476 | 35419.8 |
| protein yohp | D2183_10120 | Not Available | Negative | 2050864 - 2050947 | 3092.28 |
| multidrug resistance outer membrane protein mdtq | D2183_10130 | Not Available | Positive | 2051171 - 2052607 | 52171.9 |
| sdr family oxidoreductase | D2183_10135 | Not Available | Positive | 2052660 - 2053421 | 26918.4 |
| deda family protein | D2183_10140 | Not Available | Negative | 2053540 - 2054118 | 21445.9 |
| yip1 family protein | D2183_10145 | Not Available | Positive | 2054288 - 2054875 | 21692.0 |
| d-alanyl-d-alanine endopeptidase | D2183_10150 | Not Available | Positive | 2055049 - 2055981 | 33855.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





