Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside permease nupx | D2183_09990 | Not Available | Positive | 2025992 - 2027242 | 43410.2 |
| sugar kinase | D2183_09995 | Not Available | Negative | 2027298 - 2028386 | 39662.5 |
| endonuclease | D2183_10000 | Not Available | Negative | 2028389 - 2029246 | 31492.2 |
| yeih family protein | D2183_10005 | Not Available | Negative | 2029320 - 2030369 | 36884.3 |
| lysr family transcriptional regulator | D2183_10010 | Not Available | Positive | 2030468 - 2031349 | 32725.7 |
| amino acid permease | D2183_10015 | Not Available | Positive | 2031554 - 2033023 | 53536.9 |
| catecholate siderophore receptor cira | D2183_10025 | Not Available | Positive | 2033315 - 2035306 | 73934.6 |
| s-formylglutathione hydrolase | D2183_10030 | Not Available | Negative | 2035337 - 2036173 | 31245.8 |
| hypothetical protein | D2183_10035 | Not Available | Negative | 2036101 - 2036277 | 6430.51 |
| gtp cyclohydrolase i fole | D2183_10040 | Not Available | Positive | 2036431 - 2037099 | 24832.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





