Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetate metabolism regulator atoc | D2183_09680 | Not Available | Negative | 1958949 - 1960334 | 52151.5 |
| two-component system sensor histidine kinase atos | D2183_09685 | Not Available | Negative | 1960331 - 1962157 | 67808.1 |
| two-component system sensor histidine kinase rcsc | D2183_09690 | Not Available | Positive | 1962324 - 1965173 | 106490.0 |
| dna-binding response regulator | D2183_09695 | Not Available | Negative | 1965259 - 1965909 | 23672.0 |
| phosphotransferase rcsd | D2183_09700 | Not Available | Negative | 1965926 - 1968598 | 100296.0 |
| porin ompc | D2183_09710 | Not Available | Positive | 1969337 - 1970431 | 40242.1 |
| fad:protein fmn transferase apbe | D2183_09715 | Not Available | Positive | 1970543 - 1971598 | 38522.9 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | D2183_09720 | Not Available | Positive | 1971672 - 1972736 | 39340.0 |
| dna oxidative demethylase alkb | D2183_09725 | Not Available | Positive | 1972736 - 1973386 | 24031.8 |
| microcin j25 efflux abc transporter yoji | D2183_09730 | Not Available | Positive | 1973462 - 1975105 | 61542.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





