Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate transporter | D2183_09575 | Not Available | Positive | 1928016 - 1929374 | 50346.3 |
| glycerophosphodiester phosphodiesterase | D2183_09580 | Not Available | Positive | 1929379 - 1930455 | 40819.5 |
| lysr family transcriptional regulator | D2183_09585 | Not Available | Negative | 1930475 - 1931374 | 33556.0 |
| mfs transporter | D2183_09590 | Not Available | Positive | 1931526 - 1932716 | 42901.2 |
| lipopolysaccharide kinase inaa | D2183_09595 | Not Available | Positive | 1932797 - 1933447 | 25299.5 |
| ferredoxin | D2183_09600 | Not Available | Negative | 1933501 - 1933755 | 9293.29 |
| ribonucleotide-diphosphate reductase subunit beta | D2183_09605 | Not Available | Negative | 1933755 - 1934885 | 43503.6 |
| ribonucleoside-diphosphate reductase subunit alpha | D2183_09610 | Not Available | Negative | 1935031 - 1937316 | 85721.0 |
| aida-i family autotransporter yfal | D2183_09620 | Not Available | Positive | 1938012 - 1941770 | 132034.0 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | D2183_09625 | Not Available | Negative | 1941911 - 1942633 | 26543.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





