Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence/damage-inducible protein a | D2183_09525 | Not Available | Positive | 1916721 - 1917923 | 44246.3 |
| iclr family transcriptional regulator | D2183_09530 | Not Available | Positive | 1918143 - 1918925 | 28891.8 |
| l-rhamnonate dehydratase | D2183_09535 | Not Available | Positive | 1918940 - 1920145 | 44211.9 |
| mfs transporter | D2183_09540 | Not Available | Positive | 1920202 - 1921491 | 46168.2 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | D2183_09545 | Not Available | Positive | 1921509 - 1922312 | 28860.6 |
| hypothetical protein | D2183_09550 | Not Available | Negative | 1922353 - 1922538 | 6865.19 |
| isncy family transposase | D2183_09555 | Not Available | Negative | 1922551 - 1923486 | 36186.4 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | D2183_09560 | Not Available | Negative | 1923679 - 1924869 | 44124.5 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit b | D2183_09565 | Not Available | Negative | 1924866 - 1926125 | 45294.8 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | D2183_09570 | Not Available | Negative | 1926115 - 1927743 | 58934.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





