Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit j | D2183_09375 | Not Available | Positive | 1886962 - 1887516 | 19875.9 |
| nadh-quinone oxidoreductase subunit k | D2183_09380 | Not Available | Positive | 1887513 - 1887815 | 10845.8 |
| nadh-quinone oxidoreductase subunit l | D2183_09385 | Not Available | Positive | 1887812 - 1889653 | 66412.1 |
| nadh-quinone oxidoreductase subunit m | D2183_09390 | Not Available | Positive | 1889819 - 1891348 | 56542.0 |
| nadh-quinone oxidoreductase subunit n | D2183_09395 | Not Available | Positive | 1891355 - 1892812 | 52061.3 |
| duf1877 family protein | D2183_09400 | Not Available | Negative | 1892879 - 1893382 | 18925.7 |
| m20/m25/m40 family metallo-hydrolase | D2183_09405 | Not Available | Negative | 1893482 - 1894456 | 36058.0 |
| vwa domain-containing protein | D2183_09410 | Not Available | Positive | 1894594 - 1896360 | 64915.7 |
| deubiquitinase | D2183_09415 | Not Available | Negative | 1896431 - 1897639 | 45887.2 |
| ribonuclease z | D2183_09420 | Not Available | Negative | 1897830 - 1898747 | 32981.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





