Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | D2183_09275 | Not Available | Positive | 1863681 - 1864223 | 20376.9 |
| putative basic amino acid antiporter yfcc | D2183_09280 | Not Available | Negative | 1864257 - 1865777 | 54747.0 |
| phosphate acetyltransferase | D2183_09285 | Not Available | Negative | 1865967 - 1868111 | 77203.6 |
| acetate kinase | D2183_09290 | Not Available | Negative | 1868186 - 1869388 | 43293.0 |
| duf412 domain-containing protein | D2183_09295 | Not Available | Positive | 1869726 - 1870181 | 17214.1 |
| yfbu family protein | D2183_09300 | Not Available | Positive | 1870265 - 1870759 | 19537.4 |
| sugar phosphatase | D2183_09305 | Not Available | Positive | 1870770 - 1871420 | 23026.8 |
| slc13 family permease | D2183_09310 | Not Available | Positive | 1871507 - 1873339 | 65924.0 |
| 5'-deoxynucleotidase | D2183_09315 | Not Available | Negative | 1873398 - 1873997 | 22679.3 |
| glutamate--pyruvate aminotransferase alaa | D2183_09320 | Not Available | Negative | 1874081 - 1875298 | 45548.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





