Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine abc transporter substrate-binding protein hisj | D2183_09225 | Not Available | Positive | 1856069 - 1856851 | 28484.9 |
| histidine abc transporter permease | D2183_09230 | Not Available | Positive | 1856941 - 1857627 | 24634.8 |
| histidine abc transporter permease | D2183_09235 | Not Available | Positive | 1857624 - 1858340 | 26871.3 |
| histidine transport atp-binding protein hisp | D2183_09240 | Not Available | Positive | 1858348 - 1859121 | 28626.8 |
| rpn family recombination-promoting nuclease/putative transposase | D2183_09245 | Not Available | Positive | 1859318 - 1860208 | 34186.5 |
| tigr01777 family protein | D2183_09250 | Not Available | Negative | 1860256 - 1861149 | 32700.7 |
| dihydroneopterin triphosphate 2'-epimerase | D2183_09255 | Not Available | Negative | 1861170 - 1861532 | 14082.8 |
| gsh-dependent disulfide bond oxidoreductase | D2183_09260 | Not Available | Negative | 1861589 - 1862236 | 24455.1 |
| glutathione transferase | D2183_09265 | Not Available | Positive | 1862372 - 1863016 | 24327.0 |
| phosphodiesterase yfce | D2183_09270 | Not Available | Positive | 1863069 - 1863623 | 20123.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





