Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-insensitive murein endopeptidase | D2183_09125 | Not Available | Positive | 1836606 - 1837430 | 30197.5 |
| hypothetical protein | D2183_09130 | Not Available | Positive | 1837430 - 1838239 | 28631.2 |
| elongation factor p hydroxylase | D2183_09135 | Not Available | Positive | 1838239 - 1838787 | 21116.6 |
| yfcl family protein | D2183_09140 | Not Available | Positive | 1838821 - 1839099 | 10037.7 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | D2183_09145 | Not Available | Negative | 1839155 - 1841161 | 74264.9 |
| 3-oxoacyl-acp synthase i | D2183_09150 | Not Available | Positive | 1841320 - 1842540 | 42615.9 |
| hypothetical protein | D2183_09155 | Not Available | Negative | 1842609 - 1842830 | 8582.48 |
| arabinose transporter | D2183_09160 | Not Available | Positive | 1842772 - 1843950 | 40463.7 |
| flagella biosynthesis regulator flk | D2183_09165 | Not Available | Negative | 1843947 - 1844942 | 36642.4 |
| 4-phosphoerythronate dehydrogenase pdxb | D2183_09170 | Not Available | Positive | 1845041 - 1846177 | 41365.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





