Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane usher protein | D2183_09070 | Not Available | Positive | 1825945 - 1828596 | 97225.0 |
| fimbrial protein stfd | D2183_09075 | Not Available | Positive | 1828616 - 1829368 | 27825.6 |
| fimbrial protein | D2183_09080 | Not Available | Positive | 1829385 - 1829876 | 17070.6 |
| fimbrial protein | D2183_09085 | Not Available | Positive | 1829873 - 1830343 | 17147.4 |
| fimbrial protein | D2183_09090 | Not Available | Positive | 1830340 - 1830864 | 18096.5 |
| duf2544 domain-containing protein | D2183_09095 | Not Available | Positive | 1830866 - 1831705 | 30661.2 |
| atp-binding protein | D2183_09105 | Not Available | Negative | 1832389 - 1833747 | 50819.1 |
| endonuclease smrb | D2183_09110 | Not Available | Negative | 1833833 - 1834384 | 21000.4 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | D2183_09115 | Not Available | Positive | 1834550 - 1835482 | 35017.7 |
| chorismate synthase | D2183_09120 | Not Available | Positive | 1835517 - 1836602 | 39153.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





