Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stringent starvation protein a | D2183_08735 | Not Available | Negative | 1760593 - 1761231 | 24306.3 |
| 30s ribosomal protein s9 | D2183_08740 | Not Available | Negative | 1761625 - 1762017 | 14857.1 |
| 50s ribosomal protein l13 | D2183_08745 | Not Available | Negative | 1762033 - 1762461 | 16019.5 |
| cell division protein zape | D2183_08750 | Not Available | Negative | 1762680 - 1763807 | 43071.1 |
| duf1043 family protein | D2183_08755 | Not Available | Positive | 1764001 - 1764399 | 14961.7 |
| periplasmic ph-dependent serine endoprotease degq | D2183_08760 | Not Available | Positive | 1764553 - 1765920 | 47207.9 |
| outer membrane-stress sensor serine endopeptidase degs | D2183_08765 | Not Available | Positive | 1766010 - 1767077 | 37583.4 |
| malate dehydrogenase | D2183_08770 | Not Available | Negative | 1767140 - 1768078 | 32339.3 |
| transcriptional regulator argr | D2183_08775 | Not Available | Positive | 1768513 - 1768983 | 16995.5 |
| duf1471 domain-containing protein | D2183_08780 | Not Available | Positive | 1769348 - 1769611 | 9196.89 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





