Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | D2183_08375 | Not Available | Positive | 1690965 - 1691267 | 11271.6 |
| n-acetyltransferase | D2183_08380 | Not Available | Negative | 1691254 - 1691757 | 18534.8 |
| scp2 domain-containing protein | D2183_08385 | Not Available | Negative | 1691751 - 1692275 | 19673.0 |
| u32 family peptidase | D2183_08390 | Not Available | Positive | 1692484 - 1693479 | 37049.2 |
| u32 family peptidase | D2183_08395 | Not Available | Positive | 1693488 - 1694366 | 32507.1 |
| llm class flavin-dependent oxidoreductase | D2183_08400 | Not Available | Positive | 1694447 - 1695454 | 37219.6 |
| tryptophan permease | D2183_08405 | Not Available | Negative | 1695573 - 1696817 | 44427.4 |
| dead/deah box family atp-dependent rna helicase | D2183_08410 | Not Available | Negative | 1696971 - 1698860 | 70550.5 |
| protein yrbn | D2183_08415 | Not Available | Negative | 1698853 - 1698933 | 2979.59 |
| lipoprotein nlpi | D2183_08420 | Not Available | Negative | 1699040 - 1699924 | 33622.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





