Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactosamine-6-phosphate isomerase | D2183_08325 | Not Available | Positive | 1682646 - 1683413 | 28370.3 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | D2183_08330 | Not Available | Negative | 1683463 - 1684326 | 31478.8 |
| penicillin-binding protein activator | D2183_08335 | Not Available | Positive | 1684391 - 1686427 | 72898.4 |
| yran family protein | D2183_08340 | Not Available | Positive | 1686385 - 1686780 | 14800.4 |
| dnaa initiator-associating protein diaa | D2183_08345 | Not Available | Positive | 1686800 - 1687390 | 21091.4 |
| osmotically-inducible protein osmy | D2183_08350 | Not Available | Positive | 1687400 - 1687975 | 20029.1 |
| permease | D2183_08355 | Not Available | Negative | 1688097 - 1689137 | 37195.8 |
| nad-dependent epimerase/dehydratase family protein | D2183_08360 | Not Available | Negative | 1689210 - 1689845 | 23187.3 |
| glutamine amidotransferase | D2183_08365 | Not Available | Positive | 1689973 - 1690491 | 18815.4 |
| hypothetical protein | D2183_08370 | Not Available | Negative | 1690471 - 1690914 | 16852.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





