Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhac family protein | D2183_08220 | Not Available | Positive | 1662993 - 1664180 | 45255.4 |
| glycerate 2-kinase | D2183_08230 | Not Available | Negative | 1664696 - 1665841 | 39167.7 |
| 2-hydroxy-3-oxopropionate reductase | D2183_08235 | Not Available | Negative | 1665938 - 1666828 | 30661.6 |
| 5-keto-4-deoxy-d-glucarate aldolase | D2183_08240 | Not Available | Negative | 1666858 - 1667628 | 27400.6 |
| mfs transporter | D2183_08245 | Not Available | Negative | 1667644 - 1668978 | 48982.1 |
| galactarate dehydratase | D2183_08250 | Not Available | Positive | 1669353 - 1670924 | 56437.0 |
| type ii toxin-antitoxin system prlf family antitoxin | D2183_08255 | Not Available | Positive | 1671073 - 1671408 | 12344.7 |
| toxin yhav | D2183_08260 | Not Available | Positive | 1671408 - 1671872 | 17837.2 |
| deor family transcriptional regulator | D2183_08265 | Not Available | Negative | 1671927 - 1672736 | 29574.3 |
| tagatose-bisphosphate aldolase subunit kbaz | D2183_08270 | Not Available | Positive | 1672985 - 1674265 | 47251.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





