Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haaap family serine/threonine permease | D2183_08160 | Not Available | Negative | 1651257 - 1652588 | 48307.6 |
| l-serine ammonia-lyase | D2183_08170 | Not Available | Negative | 1652863 - 1654227 | 48476.6 |
| enamine/imine deaminase | D2183_08175 | Not Available | Negative | 1654299 - 1654688 | 14008.0 |
| pfl-like enzyme tdce | D2183_08180 | Not Available | Negative | 1654702 - 1656996 | 85954.4 |
| propionate kinase | D2183_08185 | Not Available | Negative | 1657030 - 1658238 | 43398.7 |
| threonine/serine transporter tdcc | D2183_08190 | Not Available | Negative | 1658264 - 1659595 | 48895.8 |
| serine/threonine dehydratase | D2183_08195 | Not Available | Negative | 1659617 - 1660606 | 35234.5 |
| transcriptional regulator | D2183_08205 | Not Available | Negative | 1660705 - 1661643 | 34540.9 |
| dna-binding transcriptional activator tdcr | D2183_08210 | Not Available | Positive | 1661832 - 1662176 | 13637.4 |
| hypothetical protein | D2183_08215 | Not Available | Positive | 1662432 - 1662971 | 20598.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





