Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D2183_08055 | Not Available | Positive | 1634464 - 1635762 | 46909.0 |
| pilus assembly protein cbld | D2183_08060 | Not Available | Negative | 1635838 - 1636932 | 40364.9 |
| fimbrial protein | D2183_08065 | Not Available | Negative | 1636929 - 1639613 | 98425.7 |
| fimbrial protein | D2183_08070 | Not Available | Negative | 1639704 - 1640204 | 17686.5 |
| fimbrial protein | D2183_08075 | Not Available | Negative | 1640234 - 1640857 | 23028.5 |
| gntr family transcriptional regulator | D2183_08080 | Not Available | Positive | 1641242 - 1642018 | 29837.3 |
| deda family protein | D2183_08085 | Not Available | Positive | 1642363 - 1643025 | 24587.0 |
| envz/ompr regulon moderator mzra | D2183_08090 | Not Available | Positive | 1643029 - 1643412 | 14203.0 |
| duf1090 domain-containing protein | D2183_08095 | Not Available | Positive | 1643559 - 1643927 | 13906.4 |
| duf883 domain-containing protein | D2183_08100 | Not Available | Positive | 1643965 - 1644270 | 11052.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





