Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | D2183_07695 | Not Available | Positive | 1558849 - 1559163 | 11533.1 |
| murr/rpir family transcriptional regulator | D2183_07700 | Not Available | Negative | 1559208 - 1560095 | 32250.4 |
| iron-siderophore abc transporter substrate-binding protein | D2183_07705 | Not Available | Negative | 1560092 - 1561039 | 34521.7 |
| iron abc transporter permease | D2183_07710 | Not Available | Negative | 1561050 - 1562099 | 36986.0 |
| iron abc transporter permease | D2183_07715 | Not Available | Negative | 1562096 - 1563079 | 33877.0 |
| abc transporter atp-binding protein | D2183_07720 | Not Available | Negative | 1563076 - 1563885 | 29883.5 |
| tonb-dependent siderophore receptor | D2183_07725 | Not Available | Positive | 1564259 - 1566400 | 78580.5 |
| dna topoisomerase iv subunit b | D2183_07730 | Not Available | Negative | 1566464 - 1568356 | 70217.9 |
| esterase yqia | D2183_07735 | Not Available | Negative | 1568385 - 1568966 | 21642.7 |
| phosphodiesterase | D2183_07740 | Not Available | Negative | 1568966 - 1569793 | 30939.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





