Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | D2183_07545 | Not Available | Negative | 1528160 - 1528585 | 15527.9 |
| biopolymer transporter exbb | D2183_07550 | Not Available | Negative | 1528592 - 1529326 | 26289.0 |
| hypothetical protein | D2183_07555 | Not Available | Negative | 1529319 - 1529474 | 5961.34 |
| cystathionine beta-lyase | D2183_07560 | Not Available | Positive | 1529578 - 1530765 | 43215.8 |
| deda family protein | D2183_07565 | Not Available | Positive | 1530905 - 1531564 | 24135.3 |
| arac family transcriptional regulator | D2183_07570 | Not Available | Negative | 1531604 - 1532560 | 36030.9 |
| alcohol dehydrogenase | D2183_07575 | Not Available | Positive | 1532697 - 1533860 | 42099.4 |
| 2,5-didehydrogluconate reductase dkga | D2183_07580 | Not Available | Positive | 1533965 - 1534792 | 31087.3 |
| duf3828 domain-containing protein | D2183_07585 | Not Available | Positive | 1534992 - 1535918 | 35047.1 |
| lipoprotein yqhh | D2183_07590 | Not Available | Positive | 1535969 - 1536226 | 9513.58 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





