Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-2 large chain | D2183_07495 | Not Available | Negative | 1518858 - 1520561 | 62494.6 |
| ni/fe-hydrogenase b-type cytochrome subunit | D2183_07500 | Not Available | Negative | 1520558 - 1521736 | 43604.6 |
| hydrogenase-2 operon protein hyba | D2183_07505 | Not Available | Negative | 1521726 - 1522712 | 36005.0 |
| hydrogenase-2 small chain | D2183_07510 | Not Available | Negative | 1522715 - 1523833 | 39654.3 |
| hypothetical protein | D2183_07515 | Not Available | Negative | 1523840 - 1524025 | 6965.43 |
| duf2623 domain-containing protein | D2183_07520 | Not Available | Negative | 1524022 - 1524309 | 10946.1 |
| dienelactone hydrolase family protein | D2183_07525 | Not Available | Negative | 1524428 - 1525354 | 34127.7 |
| l-glyceraldehyde 3-phosphate reductase | D2183_07530 | Not Available | Positive | 1525472 - 1526494 | 38254.8 |
| tigr00645 family protein | D2183_07535 | Not Available | Negative | 1526552 - 1527046 | 18642.3 |
| nad(p)-dependent oxidoreductase | D2183_07540 | Not Available | Positive | 1527237 - 1528121 | 31489.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





