Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | D2183_07345 | Not Available | Negative | 1484040 - 1484849 | 29471.8 |
| duf4092 domain-containing protein | D2183_07350 | Not Available | Negative | 1484979 - 1489544 | 168152.0 |
| hypothetical protein | D2183_07355 | Not Available | Positive | 1489695 - 1490000 | 11616.1 |
| glycolate permease glca | D2183_07360 | Not Available | Negative | 1490028 - 1491710 | 58923.7 |
| malate synthase g | D2183_07365 | Not Available | Negative | 1492065 - 1494236 | 80447.2 |
| protein glcg | D2183_07370 | Not Available | Negative | 1494258 - 1494662 | 13737.5 |
| glycolate oxidase iron-sulfur subunit | D2183_07375 | Not Available | Negative | 1494667 - 1495890 | 45086.7 |
| glycolate oxidase subunit glce | D2183_07380 | Not Available | Negative | 1495901 - 1496953 | 38315.1 |
| glycolate oxidase subunit glcd | D2183_07385 | Not Available | Negative | 1496953 - 1498452 | 53827.0 |
| transcriptional regulator glcc | D2183_07390 | Not Available | Positive | 1498703 - 1499467 | 28856.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





