Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease modulator hflk | D2183_06010 | Not Available | Negative | 1214713 - 1215972 | 45548.5 |
| gtpase hflx | D2183_06015 | Not Available | Negative | 1216058 - 1217338 | 48315.0 |
| rna-binding protein hfq | D2183_06020 | Not Available | Negative | 1217414 - 1217722 | 11167.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | D2183_06025 | Not Available | Negative | 1217808 - 1218758 | 35081.2 |
| dna mismatch repair endonuclease mutl | D2183_06030 | Not Available | Negative | 1218751 - 1220598 | 67865.5 |
| n-acetylmuramoyl-l-alanine amidase amib | D2183_06035 | Not Available | Negative | 1220608 - 1221945 | 47987.1 |
| trna (n6-adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase tsae | D2183_06040 | Not Available | Negative | 1221964 - 1222425 | 16854.0 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | D2183_06045 | Not Available | Negative | 1222397 - 1223944 | 54633.4 |
| trna epoxyqueuosine(34) reductase queg | D2183_06050 | Not Available | Positive | 1223943 - 1225082 | 42927.2 |
| hypothetical protein | D2183_06055 | Not Available | Negative | 1225065 - 1225118 | 2056.38 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





