Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | D2183_04770 | Not Available | Positive | 945539 - 946072 | 19101.5 |
| molecular chaperone | D2183_04775 | Not Available | Positive | 946122 - 946805 | 25382.9 |
| fimbrial biogenesis outer membrane usher protein | D2183_04780 | Not Available | Positive | 946818 - 949268 | 92291.9 |
| hypothetical protein | D2183_04785 | Not Available | Positive | 949281 - 949607 | 12096.8 |
| fimbrial family protein | D2183_04790 | Not Available | Positive | 949714 - 950241 | 19910.1 |
| transcriptional activator nhar | D2183_04795 | Not Available | Negative | 950279 - 951184 | 34258.3 |
| na+/h+ antiporter nhaa | D2183_04800 | Not Available | Negative | 951244 - 952410 | 41358.3 |
| is1 family transposase | D2183_04805 | Not Available | Negative | 952662 - 953906 | 47281.6 |
| hypothetical protein | D2183_04815 | Not Available | Negative | 955549 - 956310 | 29085.9 |
| type i toxin-antitoxin system hok family toxin | D2183_04820 | Not Available | Positive | 956865 - 957074 | 7757.71 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





