Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ET20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1375231 bp
Thymine Count
1374082 bp
Guanine Count
1409302 bp
Cytosine Count
1401104 bp
Genome Length
5559719 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
533 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-hydroxyacyl-acp dehydratase | D2183_03835 | Not Available | Negative | 748896 - 749351 | 17034.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | D2183_03840 | Not Available | Negative | 749456 - 750481 | 36026.7 |
| chaperone protein skp | D2183_03845 | Not Available | Negative | 750485 - 750970 | 17689.2 |
| outer membrane protein assembly factor bama | D2183_03850 | Not Available | Negative | 751092 - 753524 | 90557.5 |
| sigma e protease regulator rsep | D2183_03855 | Not Available | Negative | 753554 - 754906 | 49115.3 |
| phosphatidate cytidylyltransferase | D2183_03860 | Not Available | Negative | 754918 - 755775 | 31439.6 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | D2183_03865 | Not Available | Negative | 755788 - 756546 | 28314.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | D2183_03870 | Not Available | Negative | 756735 - 757931 | 43390.5 |
| ribosome-recycling factor | D2183_03875 | Not Available | Negative | 758023 - 758580 | 20639.7 |
| ump kinase | D2183_03880 | Not Available | Negative | 758730 - 759455 | 25971.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





