Parashewanella spongiae strain KCTC 22492

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Parashewanella

Description

Parashewanella spongiae strain KCTC 22492 is a microbial strain with a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is associated with the accession number QYYH00000000.1, which provides a reference point for genomic studies and further characterization. As part of the genus Parashewanella, this strain is likely to inhabit marine environments, given the ecological niches typically occupied by members of this group. The genus is known for its association with sponges, suggesting that Parashewanella spongiae strain KCTC 22492 may play a role in the complex microbial communities found within these organisms. The presence of a single replicon could suggest a potential for efficient replication and maintenance of genetic information under specific ecological conditions. This characteristic might enhance its survival and functional capabilities in the diverse habitats that sponges provide. In conclusion, the unique traits of Parashewanella spongiae strain KCTC 22492, particularly its single replicon and genetic accessibility through the provided accession number, position it as a subject of interest for understanding microbial dynamics in marine ecosystems, especially in relation to sponge-associated microbiomes. Further research on this strain could shed light on its ecological roles and interactions within these complex communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusParashewanella
SpeciesParashewanella spongiae
Strainstrain KCTC 22492

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parashewanella spongiae strain KCTC 22492 Scaffold310_1, whole

Gene Summary

Adenine Count

1509187 bp

Thymine Count

1504183 bp

Guanine Count

977427 bp

Cytosine Count

976275 bp

Genome Length

4967072 bp

Protein-coding Genes

3865 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
magnesium/cobalt transporter corcD5R81_04645Not AvailableNegative1193989 - 119486132950.8
rrna maturation rnase ybeyD5R81_04650Not AvailableNegative1194904 - 119535917156.4
phoh family proteinD5R81_04655Not AvailableNegative1195349 - 119639539275.1
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabD5R81_04660Not AvailableNegative1196522 - 119794653985.4
hypothetical proteinD5R81_04665Not AvailableNegative1198140 - 11983829052.3
fad-dependent oxidoreductaseD5R81_04670Not AvailablePositive1200166 - 120135343680.4
aminoacyl-trna hydrolaseD5R81_04675Not AvailablePositive1201517 - 120210121267.8
redox-regulated atpase ychfD5R81_04680Not AvailablePositive1202182 - 120327339346.2
Trna-metNot AvailableNot AvailablePositive1203432 - 1203508Not Available
Trna-leuNot AvailableNot AvailablePositive1203536 - 1203620Not Available

Displaying genes 921 – 930 of 3960 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.