Parashewanella spongiae strain KCTC 22492

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Parashewanella

Description

Parashewanella spongiae strain KCTC 22492 is a microbial strain with a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is associated with the accession number QYYH00000000.1, which provides a reference point for genomic studies and further characterization. As part of the genus Parashewanella, this strain is likely to inhabit marine environments, given the ecological niches typically occupied by members of this group. The genus is known for its association with sponges, suggesting that Parashewanella spongiae strain KCTC 22492 may play a role in the complex microbial communities found within these organisms. The presence of a single replicon could suggest a potential for efficient replication and maintenance of genetic information under specific ecological conditions. This characteristic might enhance its survival and functional capabilities in the diverse habitats that sponges provide. In conclusion, the unique traits of Parashewanella spongiae strain KCTC 22492, particularly its single replicon and genetic accessibility through the provided accession number, position it as a subject of interest for understanding microbial dynamics in marine ecosystems, especially in relation to sponge-associated microbiomes. Further research on this strain could shed light on its ecological roles and interactions within these complex communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusParashewanella
SpeciesParashewanella spongiae
Strainstrain KCTC 22492

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parashewanella spongiae strain KCTC 22492 Scaffold310_1, whole

Gene Summary

Adenine Count

1509187 bp

Thymine Count

1504183 bp

Guanine Count

977427 bp

Cytosine Count

976275 bp

Genome Length

4967072 bp

Protein-coding Genes

3865 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ydiu family proteinD5R81_15000Not AvailablePositive3731764 - 373323655207.6
ribose-5-phosphate isomerase rpiaD5R81_15005Not AvailablePositive3733447 - 373409422803.6
hdod domain-containing proteinD5R81_15010Not AvailableNegative3734956 - 373568427544.2
tonb-dependent receptorD5R81_15015Not AvailableNegative3736621 - 373859472384.9
hypothetical proteinD5R81_15020Not AvailableNegative3738960 - 373960724183.9
nad-dependent succinate-semialdehyde dehydrogenaseD5R81_15025Not AvailablePositive3739773 - 374123352460.3
doxx family proteinD5R81_15030Not AvailablePositive3741740 - 374214414347.2
hypothetical proteinD5R81_15035Not AvailableNegative3742284 - 374277318942.4
type ii toxin-antitoxin system rele/pare family toxinD5R81_15040Not AvailableNegative3743085 - 374336910885.5
type ii toxin-antitoxin system phd/yefm family antitoxinD5R81_15045Not AvailableNegative3743359 - 37436109131.76

Displaying genes 2961 – 2970 of 3960 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.