Parashewanella spongiae strain KCTC 22492

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Parashewanella

Description

Parashewanella spongiae strain KCTC 22492 is a microbial strain with a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is associated with the accession number QYYH00000000.1, which provides a reference point for genomic studies and further characterization. As part of the genus Parashewanella, this strain is likely to inhabit marine environments, given the ecological niches typically occupied by members of this group. The genus is known for its association with sponges, suggesting that Parashewanella spongiae strain KCTC 22492 may play a role in the complex microbial communities found within these organisms. The presence of a single replicon could suggest a potential for efficient replication and maintenance of genetic information under specific ecological conditions. This characteristic might enhance its survival and functional capabilities in the diverse habitats that sponges provide. In conclusion, the unique traits of Parashewanella spongiae strain KCTC 22492, particularly its single replicon and genetic accessibility through the provided accession number, position it as a subject of interest for understanding microbial dynamics in marine ecosystems, especially in relation to sponge-associated microbiomes. Further research on this strain could shed light on its ecological roles and interactions within these complex communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusParashewanella
SpeciesParashewanella spongiae
Strainstrain KCTC 22492

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parashewanella spongiae strain KCTC 22492 Scaffold310_1, whole

Gene Summary

Adenine Count

1509187 bp

Thymine Count

1504183 bp

Guanine Count

977427 bp

Cytosine Count

976275 bp

Genome Length

4967072 bp

Protein-coding Genes

3865 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr04219 family outer membrane beta-barrel proteinD5R81_08145Not AvailablePositive2049721 - 205039224184.3
outer membrane channel protein tolcD5R81_08150Not AvailableNegative2050799 - 205211247729.9
nudix domain-containing proteinD5R81_08155Not AvailablePositive2052385 - 205299323101.6
duf1249 domain-containing proteinD5R81_08160Not AvailablePositive2053004 - 205344417041.5
3',5'-cyclic-amp phosphodiesteraseD5R81_08165Not AvailablePositive2053444 - 205428632212.3
esterase yqiaD5R81_08170Not AvailablePositive2054332 - 205491021945.2
dna topoisomerase iv subunit bD5R81_08175Not AvailablePositive2054958 - 205684469543.0
l-sorbosone dehydrogenaseD5R81_08180Not AvailablePositive2056868 - 205801942235.6
dna topoisomerase iv subunit aD5R81_08185Not AvailablePositive2058016 - 206028984320.8
dna-binding response regulatorD5R81_08190Not AvailableNegative2060604 - 206126925111.0

Displaying genes 1611 – 1620 of 3960 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.