Rhodopseudomonas palustris strain 2.1.18

BacilliMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas palustris strain 2.1.18 is a Gram-negative, facultative anaerobic bacterium characterized by its bacilli shape and single-cell arrangement. This strain is motile, possessing flagella that enable movement in its environment. It thrives optimally at a temperature of 25°C and is classified as mesophilic, indicating its preference for moderate temperature ranges. This bacterium is found in diverse habitats, including aquatic environments, particularly in stratified aquatic settings, as well as terrestrial locations. Its ability to live freely in these varied environments highlights its ecological versatility and adaptability. The presence of one replicon in its genetic makeup suggests a streamlined genomic organization, which may contribute to its adaptability. Rhodopseudomonas palustris strain 2.1.18 plays a significant role in its ecosystems due to its metabolic capabilities, which allow it to utilize various organic compounds under both aerobic and anaerobic conditions. This flexibility in oxygen requirements enables it to thrive in fluctuating environmental conditions, potentially contributing to nutrient cycling in aquatic and terrestrial ecosystems. The strain's ability to inhabit stratified aquatic environments emphasizes its ecological importance, as it may participate in processes like organic matter decomposition and nitrogen fixation, thereby influencing the productivity and health of its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas palustris
Strainstrain 2.1.18

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas palustris strain 2.1.18
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
Habitataquatic; stratified aquatic environments; terrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas palustris strain 2.1.18

Gene Summary

Adenine Count

972375 bp

Thymine Count

973001 bp

Guanine Count

1840871 bp

Cytosine Count

1841773 bp

Genome Length

5628020 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cbb3-type cytochrome c oxidase subunit 3D4Q52_04515Not AvailablePositive972242 - 9724066251.71
cytochrome-c oxidase, cbb3-type subunit iiiD4Q52_04520Not AvailablePositive972413 - 97329431283.9
cytochrome c oxidase accessory protein ccogD4Q52_04525Not AvailablePositive973413 - 97487654839.8
nitrogen fixation protein fixhD4Q52_04530Not AvailablePositive974898 - 97539517944.7
heavy metal translocating p-type atpaseD4Q52_04535Not AvailablePositive975433 - 97761977235.0
cbb3-type cytochrome oxidase assembly protein ccosD4Q52_04540Not AvailablePositive977620 - 9777875934.3
hypothetical proteinD4Q52_04545Not AvailablePositive977800 - 9780067843.51
8-amino-7-oxononanoate synthaseD4Q52_04550Not AvailablePositive978398 - 97952840153.9
atp-dependent dethiobiotin synthetase biodD4Q52_04555Not AvailablePositive979525 - 98016022336.1
adenosylmethionine--8-amino-7-oxononanoate transaminaseD4Q52_04560Not AvailablePositive980160 - 98141345723.7

Displaying genes 961 – 970 of 5140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.