Rhodopseudomonas palustris strain 2.1.18

BacilliMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas palustris strain 2.1.18 is a Gram-negative, facultative anaerobic bacterium characterized by its bacilli shape and single-cell arrangement. This strain is motile, possessing flagella that enable movement in its environment. It thrives optimally at a temperature of 25°C and is classified as mesophilic, indicating its preference for moderate temperature ranges. This bacterium is found in diverse habitats, including aquatic environments, particularly in stratified aquatic settings, as well as terrestrial locations. Its ability to live freely in these varied environments highlights its ecological versatility and adaptability. The presence of one replicon in its genetic makeup suggests a streamlined genomic organization, which may contribute to its adaptability. Rhodopseudomonas palustris strain 2.1.18 plays a significant role in its ecosystems due to its metabolic capabilities, which allow it to utilize various organic compounds under both aerobic and anaerobic conditions. This flexibility in oxygen requirements enables it to thrive in fluctuating environmental conditions, potentially contributing to nutrient cycling in aquatic and terrestrial ecosystems. The strain's ability to inhabit stratified aquatic environments emphasizes its ecological importance, as it may participate in processes like organic matter decomposition and nitrogen fixation, thereby influencing the productivity and health of its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas palustris
Strainstrain 2.1.18

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas palustris strain 2.1.18
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
Habitataquatic; stratified aquatic environments; terrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas palustris strain 2.1.18

Gene Summary

Adenine Count

972375 bp

Thymine Count

973001 bp

Guanine Count

1840871 bp

Cytosine Count

1841773 bp

Genome Length

5628020 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ompa family proteinD4Q52_24945Not AvailablePositive5383480 - 538411222326.4
hlyd family efflux transporter periplasmic adaptor subunitD4Q52_24950Not AvailablePositive5384468 - 538540332670.6
efflux rnd transporter permease subunitD4Q52_24955Not AvailablePositive5385404 - 5388487110133.0
crp/fnr family transcriptional regulatorD4Q52_24960Not AvailableNegative5388846 - 538952925180.5
hlyd family efflux transporter periplasmic adaptor subunitD4Q52_24965Not AvailablePositive5389739 - 539063830970.6
hypothetical proteinD4Q52_24975Not AvailablePositive5391124 - 53913036473.85
tldd/pmba family proteinD4Q52_24980Not AvailablePositive5391300 - 539269748566.6
3'(2'),5'-bisphosphate nucleotidase cysqD4Q52_24985Not AvailablePositive5392684 - 539349628537.8
duf4170 domain-containing proteinD4Q52_24990Not AvailablePositive5393529 - 53937749143.87
3-deoxy-d-manno-octulosonic acid transferaseD4Q52_24995Not AvailablePositive5393833 - 539513746868.9

Displaying genes 4911 – 4920 of 5140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.