Rhodopseudomonas palustris strain 2.1.18

BacilliMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas palustris strain 2.1.18 is a Gram-negative, facultative anaerobic bacterium characterized by its bacilli shape and single-cell arrangement. This strain is motile, possessing flagella that enable movement in its environment. It thrives optimally at a temperature of 25°C and is classified as mesophilic, indicating its preference for moderate temperature ranges. This bacterium is found in diverse habitats, including aquatic environments, particularly in stratified aquatic settings, as well as terrestrial locations. Its ability to live freely in these varied environments highlights its ecological versatility and adaptability. The presence of one replicon in its genetic makeup suggests a streamlined genomic organization, which may contribute to its adaptability. Rhodopseudomonas palustris strain 2.1.18 plays a significant role in its ecosystems due to its metabolic capabilities, which allow it to utilize various organic compounds under both aerobic and anaerobic conditions. This flexibility in oxygen requirements enables it to thrive in fluctuating environmental conditions, potentially contributing to nutrient cycling in aquatic and terrestrial ecosystems. The strain's ability to inhabit stratified aquatic environments emphasizes its ecological importance, as it may participate in processes like organic matter decomposition and nitrogen fixation, thereby influencing the productivity and health of its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas palustris
Strainstrain 2.1.18

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas palustris strain 2.1.18
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
Habitataquatic; stratified aquatic environments; terrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas palustris strain 2.1.18

Gene Summary

Adenine Count

972375 bp

Thymine Count

973001 bp

Guanine Count

1840871 bp

Cytosine Count

1841773 bp

Genome Length

5628020 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-sulfur cluster assembly accessory proteinD4Q52_24385Not AvailableNegative5257328 - 525764811003.1
nitrogen fixation protein nifqD4Q52_24390Not AvailableNegative5257944 - 525864225725.8
ferredoxin iii, nif-specificD4Q52_24395Not AvailableNegative5258653 - 525896411156.3
hypothetical proteinD4Q52_24400Not AvailableNegative5259023 - 52592297602.21
nifx-associated nitrogen fixation proteinD4Q52_24405Not AvailableNegative5259247 - 525972017632.6
nitrogen fixation protein nifxD4Q52_24410Not AvailableNegative5259722 - 526012014632.6
nitrogenase iron-molybdenum cofactor biosynthesis protein nifnD4Q52_24415Not AvailableNegative5260167 - 526154048905.2
nitrogenase iron-molybdenum cofactor biosynthesis protein nifeD4Q52_24420Not AvailableNegative5261551 - 526301753421.4
nitrogenase molybdenum-iron protein subunit betaD4Q52_24425Not AvailableNegative5263069 - 526462857500.1
nitrogenase molybdenum-iron protein alpha chainD4Q52_24430Not AvailableNegative5264707 - 526617054860.6

Displaying genes 4801 – 4810 of 5140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.