Rhodopseudomonas palustris strain 2.1.18

BacilliMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas palustris strain 2.1.18 is a Gram-negative, facultative anaerobic bacterium characterized by its bacilli shape and single-cell arrangement. This strain is motile, possessing flagella that enable movement in its environment. It thrives optimally at a temperature of 25°C and is classified as mesophilic, indicating its preference for moderate temperature ranges. This bacterium is found in diverse habitats, including aquatic environments, particularly in stratified aquatic settings, as well as terrestrial locations. Its ability to live freely in these varied environments highlights its ecological versatility and adaptability. The presence of one replicon in its genetic makeup suggests a streamlined genomic organization, which may contribute to its adaptability. Rhodopseudomonas palustris strain 2.1.18 plays a significant role in its ecosystems due to its metabolic capabilities, which allow it to utilize various organic compounds under both aerobic and anaerobic conditions. This flexibility in oxygen requirements enables it to thrive in fluctuating environmental conditions, potentially contributing to nutrient cycling in aquatic and terrestrial ecosystems. The strain's ability to inhabit stratified aquatic environments emphasizes its ecological importance, as it may participate in processes like organic matter decomposition and nitrogen fixation, thereby influencing the productivity and health of its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas palustris
Strainstrain 2.1.18

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas palustris strain 2.1.18
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
Habitataquatic; stratified aquatic environments; terrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas palustris strain 2.1.18

Gene Summary

Adenine Count

972375 bp

Thymine Count

973001 bp

Guanine Count

1840871 bp

Cytosine Count

1841773 bp

Genome Length

5628020 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
antibiotic biosynthesis monooxygenaseD4Q52_10815Not AvailableNegative2326566 - 232686511096.3
antibiotic biosynthesis monooxygenaseD4Q52_10820Not AvailableNegative2326901 - 232720010789.1
urease subunit alphaD4Q52_10825Not AvailableNegative2327467 - 232917960563.7
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseD4Q52_10830Not AvailableNegative2329176 - 232971219953.5
urease subunit betaD4Q52_10835Not AvailableNegative2329740 - 233004511050.2
urease subunit gammaD4Q52_10840Not AvailableNegative2330181 - 233048311050.6
urease accessory protein uredD4Q52_10845Not AvailableNegative2330539 - 233137829460.7
urea abc transporter atp-binding subunit urteD4Q52_10850Not AvailableNegative2331616 - 233231124975.5
urea abc transporter atp-binding protein urtdD4Q52_10855Not AvailableNegative2332457 - 233322128158.9
urea abc transporter permease subunit urtcD4Q52_10860Not AvailableNegative2333218 - 233441143148.6

Displaying genes 2201 – 2210 of 5140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.