Rhodopseudomonas palustris strain 2.1.18

BacilliMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas palustris strain 2.1.18 is a Gram-negative, facultative anaerobic bacterium characterized by its bacilli shape and single-cell arrangement. This strain is motile, possessing flagella that enable movement in its environment. It thrives optimally at a temperature of 25°C and is classified as mesophilic, indicating its preference for moderate temperature ranges. This bacterium is found in diverse habitats, including aquatic environments, particularly in stratified aquatic settings, as well as terrestrial locations. Its ability to live freely in these varied environments highlights its ecological versatility and adaptability. The presence of one replicon in its genetic makeup suggests a streamlined genomic organization, which may contribute to its adaptability. Rhodopseudomonas palustris strain 2.1.18 plays a significant role in its ecosystems due to its metabolic capabilities, which allow it to utilize various organic compounds under both aerobic and anaerobic conditions. This flexibility in oxygen requirements enables it to thrive in fluctuating environmental conditions, potentially contributing to nutrient cycling in aquatic and terrestrial ecosystems. The strain's ability to inhabit stratified aquatic environments emphasizes its ecological importance, as it may participate in processes like organic matter decomposition and nitrogen fixation, thereby influencing the productivity and health of its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas palustris
Strainstrain 2.1.18

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas palustris strain 2.1.18
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
Habitataquatic; stratified aquatic environments; terrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas palustris strain 2.1.18

Gene Summary

Adenine Count

972375 bp

Thymine Count

973001 bp

Guanine Count

1840871 bp

Cytosine Count

1841773 bp

Genome Length

5628020 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c biogenesis protein ccdaD4Q52_09390Not AvailableNegative2016644 - 201737825473.3
peptidase s58 family proteinD4Q52_09395Not AvailablePositive2017521 - 201851633281.7
ef-hand domain-containing proteinD4Q52_09400Not AvailableNegative2018506 - 201924023785.0
ribulose-phosphate 3-epimeraseD4Q52_09405Not AvailablePositive2019542 - 202024024256.4
aspartate aminotransferase family proteinD4Q52_09410Not AvailableNegative2021165 - 202255650508.4
hopanoid biosynthesis-associated rnd transporter hpnnD4Q52_09415Not AvailableNegative2022973 - 202557992754.0
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseD4Q52_09420Not AvailablePositive2025875 - 202681933664.5
adenosyl-hopene transferase hpnhD4Q52_09425Not AvailablePositive2026860 - 202802043200.2
phosphorylaseD4Q52_09430Not AvailableNegative2028369 - 202910325476.8
squalene--hopene cyclaseD4Q52_09435Not AvailableNegative2029100 - 203106472535.3

Displaying genes 1921 – 1930 of 5140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.