Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc protease | D3879_03330 | Not Available | Negative | 707922 - 708422 | 18608.5 |
| duf2780 domain-containing protein | D3879_03335 | Not Available | Negative | 708696 - 709277 | 18992.6 |
| formaldehyde dehydrogenase, glutathione-independent | D3879_03340 | Not Available | Negative | 709606 - 710805 | 42273.8 |
| formyltetrahydrofolate deformylase | D3879_03345 | Not Available | Negative | 710901 - 711758 | 32558.0 |
| duf1534 domain-containing protein | D3879_03350 | Not Available | Positive | 711757 - 711927 | 6265.62 |
| sarcosine oxidase subunit gamma family protein | D3879_03355 | Not Available | Negative | 711917 - 712546 | 23053.5 |
| sarcosine oxidase subunit alpha | D3879_03360 | Not Available | Negative | 712628 - 715660 | 109879.0 |
| sarcosine oxidase subunit delta family protein | D3879_03365 | Not Available | Negative | 715657 - 715986 | 12307.4 |
| sarcosine oxidase subunit beta family protein | D3879_03370 | Not Available | Negative | 716198 - 717448 | 45053.9 |
| serine hydroxymethyltransferase | D3879_03375 | Not Available | Negative | 717578 - 718831 | 44709.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





